R/sample_incidence_rates.R
sample_incidence_rates.RdFunction to sample Sutherland Incidence rates to Include Uncertainty
sample_incidence_rates(incidence_rates, population_data, samples = 100)
| incidence_rates | Incidence rates as formated by |
|---|---|
| population_data | Population data as formated by |
| samples | Numeric, the number of samples to take. Defaults to 100. |
A list of lists. Each list contains matrices of sampled incidence rates for unvaccinated, vaccinated, tuberculin postive and inelgible populations.
sample_incidence_rates(sutherland_incidence_rates, sutherland_data, samples = 5)#> [[1]] #> [[1]]$Unvaccinated #> 15-19 years 20-24 years 25-29 years #> 1967-71 24.221845 20.14714 10.18676 #> 1972-1976 12.137628 10.70028 0.00000 #> 1977-1981 6.574622 0.00000 0.00000 #> #> [[1]]$Vaccinated #> 15-19 years 20-24 years 25-29 years #> 1967-71 2.533937 4.751131 3.21267 #> 1972-1976 2.747253 2.786499 0.00000 #> 1977-1981 1.590595 0.000000 0.00000 #> #> [[1]]$Notifications.Prevented #> 15-19 years 20-24 years 25-29 years #> 1967-71 21.687908 15.396011 6.974088 #> 1972-1976 9.390375 7.913778 0.000000 #> 1977-1981 4.984027 0.000000 0.000000 #> #> [[1]]$Tuberculin #> 15-19 years 20-24 years 25-29 years #> 1967-71 15.350877 9.398496 3.759398 #> 1972-1976 10.932427 2.186485 0.000000 #> 1977-1981 6.206334 0.000000 0.000000 #> #> [[1]]$Inelgible #> 15-19 years 20-24 years 25-29 years #> 1967-71 24.221845 20.14714 10.18676 #> 1972-1976 12.137628 10.70028 0.00000 #> 1977-1981 6.574622 0.00000 0.00000 #> #> #> [[2]] #> [[2]]$Unvaccinated #> 15-19 years 20-24 years 25-29 years #> 1967-71 26.259196 19.01528 12.45048 #> 1972-1976 10.700277 11.81822 0.00000 #> 1977-1981 7.853021 0.00000 0.00000 #> #> [[2]]$Vaccinated #> 15-19 years 20-24 years 25-29 years #> 1967-71 2.624434 4.253394 4.117647 #> 1972-1976 2.511774 2.786499 0.000000 #> 1977-1981 1.694329 0.000000 0.000000 #> #> [[2]]$Notifications.Prevented #> 15-19 years 20-24 years 25-29 years #> 1967-71 23.634762 14.761886 8.332834 #> 1972-1976 8.188503 9.031717 0.000000 #> 1977-1981 6.158691 0.000000 0.000000 #> #> [[2]]$Tuberculin #> 15-19 years 20-24 years 25-29 years #> 1967-71 20.676692 7.832080 4.699248 #> 1972-1976 13.118912 4.737385 0.000000 #> 1977-1981 7.536263 0.000000 0.000000 #> #> [[2]]$Inelgible #> 15-19 years 20-24 years 25-29 years #> 1967-71 26.259196 19.01528 12.45048 #> 1972-1976 10.700277 11.81822 0.00000 #> 1977-1981 7.853021 0.00000 0.00000 #> #> #> [[3]] #> [[3]]$Unvaccinated #> 15-19 years 20-24 years 25-29 years #> 1967-71 21.50538 17.43067 14.03509 #> 1972-1976 11.17939 10.54057 0.00000 #> 1977-1981 6.75725 0.00000 0.00000 #> #> [[3]]$Vaccinated #> 15-19 years 20-24 years 25-29 years #> 1967-71 2.533937 5.339367 3.755656 #> 1972-1976 2.668760 2.982732 0.000000 #> 1977-1981 2.074689 0.000000 0.000000 #> #> [[3]]$Notifications.Prevented #> 15-19 years 20-24 years 25-29 years #> 1967-71 18.971440 12.09131 10.27943 #> 1972-1976 8.510634 7.55784 0.00000 #> 1977-1981 4.682562 0.00000 0.00000 #> #> [[3]]$Tuberculin #> 15-19 years 20-24 years 25-29 years #> 1967-71 19.423559 5.639098 3.132832 #> 1972-1976 14.212155 2.550900 0.000000 #> 1977-1981 3.546477 0.000000 0.000000 #> #> [[3]]$Inelgible #> 15-19 years 20-24 years 25-29 years #> 1967-71 21.50538 17.43067 14.03509 #> 1972-1976 11.17939 10.54057 0.00000 #> 1977-1981 6.75725 0.00000 0.00000 #> #> #> [[4]] #> [[4]]$Unvaccinated #> 15-19 years 20-24 years 25-29 years #> 1967-71 23.316355 20.82626 9.734012 #> 1972-1976 8.783810 11.81822 0.000000 #> 1977-1981 4.930966 0.00000 0.000000 #> #> [[4]]$Vaccinated #> 15-19 years 20-24 years 25-29 years #> 1967-71 2.714932 4.072398 3.891403 #> 1972-1976 2.080063 2.943485 0.000000 #> 1977-1981 1.625173 0.000000 0.000000 #> #> [[4]]$Notifications.Prevented #> 15-19 years 20-24 years 25-29 years #> 1967-71 20.601423 16.753861 5.84261 #> 1972-1976 6.703747 8.874732 0.00000 #> 1977-1981 3.305794 0.000000 0.00000 #> #> [[4]]$Tuberculin #> 15-19 years 20-24 years 25-29 years #> 1967-71 28.195489 8.771930 5.012531 #> 1972-1976 13.847740 3.279728 0.000000 #> 1977-1981 3.103167 0.000000 0.000000 #> #> [[4]]$Inelgible #> 15-19 years 20-24 years 25-29 years #> 1967-71 23.316355 20.82626 9.734012 #> 1972-1976 8.783810 11.81822 0.000000 #> 1977-1981 4.930966 0.00000 0.000000 #> #> #> [[5]] #> [[5]]$Unvaccinated #> 15-19 years 20-24 years 25-29 years #> 1967-71 27.164686 22.18449 11.77136 #> 1972-1976 9.422632 12.45704 0.00000 #> 1977-1981 8.400906 0.00000 0.00000 #> #> [[5]]$Vaccinated #> 15-19 years 20-24 years 25-29 years #> 1967-71 3.076923 4.253394 3.710407 #> 1972-1976 2.472527 2.904239 0.000000 #> 1977-1981 1.521438 0.000000 0.000000 #> #> [[5]]$Notifications.Prevented #> 15-19 years 20-24 years 25-29 years #> 1967-71 24.087763 17.931100 8.060957 #> 1972-1976 6.950105 9.552801 0.000000 #> 1977-1981 6.879467 0.000000 0.000000 #> #> [[5]]$Tuberculin #> 15-19 years 20-24 years 25-29 years #> 1967-71 18.796992 5.639098 3.446115 #> 1972-1976 12.025669 2.550900 0.000000 #> 1977-1981 6.206334 0.000000 0.000000 #> #> [[5]]$Inelgible #> 15-19 years 20-24 years 25-29 years #> 1967-71 27.164686 22.18449 11.77136 #> 1972-1976 9.422632 12.45704 0.00000 #> 1977-1981 8.400906 0.00000 0.00000 #> #>