All functions
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TB_decrease_as_matrix()
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Annual Decreae in TB from Single Estimate for Each Group |
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calc_model_sum_stat()
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Function to Calculate Summary Measures from Multiple Runs of the Sutherland et al.'s Model |
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fit_model_to_data()
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Fit Percentage of First Year Cases |
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gen_annual_change_scenarios()
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Function to Generate Annual Change Scenarios Based on Sutherland Assumptions |
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gen_scenario_results()
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A Function to Generate Scenario Results from the Sutherland Model |
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inc_rates_uk_e
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Incidence Rates per 100,000 in the UK born in England |
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nots_ew
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Tuberculosis Notifications in England and Wales 1913-2016 |
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sample_annual_decrease_inc_rates()
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Samples the Percentage Annual Decrease Based On Incidence Rates |
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sample_annual_decrease_nots()
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Samples the Percentage Annual Decrease Based On Notifications |
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sample_inc_rate()
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Function to Sample from the Underlying Distribution of an Incidence Rate |
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sample_incidence_rates()
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Function to sample Sutherland Incidence rates to Include Uncertainty |
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sample_model_parameters()
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Function to Sample Model Parameters |
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sample_per_decrease()
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A Function to Sample the Annual Percentage Decrease with Uncertainty |
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simulate_sutherland_model()
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Function to run multiple simulations of the Sutherland et al. Estimation Model |
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sutherland_TB_decrease
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Sutherland Assumption of Annual TB decrease |
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sutherland_data
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Data used in Sutherland et al |
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sutherland_gen_time
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Assumed Generation time From Sutherland et al. |
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sutherland_incidence_rates
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Incidence rates used in Sutherland et al |
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sutherland_model()
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Sutherland et al. Model to Estimate Impact of Ending the BCG School Scheme |
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sutherland_results
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Results for Total notifications From Sutherland et al. |
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sutherland_trans_params()
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Estimate Transmission chain parameters using Sutherland et al.s Approach |