Implementation
The model is implemented in stan using
cmdstanr with no defaults altered[1,2]. epict
incorporates additional functionality written in R[3] to enable plotting cycle
threshold posterior predictions, summarising population-level cycle
thresolhs, and summarsing covariate effects. All functionality is
modular allowing users to extend and alter the underlying model whilst
continuing to use the package framework.
References
1. Team, S. D. (2021). Stan modeling language users guide and
reference manual, 2.28.1.
2. Gabry, J., & Češnovar, R. (2021). Cmdstanr: R interface to
’CmdStan’.
3. R Core Team. (2019). R: A language and environment for
statistical computing. R Foundation for Statistical Computing. https://www.R-project.org/