Retrieve or load the WHO data into R
get_data()
Generic Get Data Function
get_data_dict()
Get the WHO Data Dictionary for TB Data
get_tb_burden()
Get the WHO TB Burden Data
Get useful regional and global summaries of TB metrics
summarise_metric()
Summarise a TB Metric - A Quick Look Summary
summarise_tb_burden()
Summarise TB Burden - By Region, Globally and for Custom Groups
Make maps of the WHO tuberculois data
map_tb_burden()
Map TB Burden
Generate exploratory plots of the WHO Tuberulosis data.
plot_tb_burden()
Plot TB Burden by Country
plot_tb_burden_overview()
Plot an overview of TB Burden for Multiple Countries
plot_tb_burden_summary()
Plot Summaries of TB Burden - By Region, Globally and for Custom Groups
Launch interactive dashboards showcasing package functionality. These dashboards require the shiny package.
run_tb_dashboard()
Run a TB Shiny Dashboard
Render parameterised reports showcasing package functionality. These reports require the rmarkdown package.
render_country_report()
Render a Country Level TB Report
Customised `{ggplot2} themes and colour palettes.
theme_who()
World Health Organization-inspired ggplot2 theme
who_palettes()
World Health Organization-inspired palettes
scale_colour_who()
Adds World Health Organization-inspired colours to plots
scale_fill_who()
Adds World Health Organization-inspired colours as fills to plots
search_data_dict()
Search the WHO TB Data Dictionary by Variable Name.
prepare_df_plot()
Generic Function to Prepare TB Burden Data for Plotting
Data supplied with the package.
available_datasets
Available Datasets
who_shapefile
WHO shapefile