Get WHO Tuberculosis Data

Retrieve or load the WHO data into R

get_data()

Generic Get Data Function

get_data_dict()

Get the WHO Data Dictionary for TB Data

get_tb_burden()

Get the WHO TB Burden Data

Summarise WHO Tuberculosis Data

Get useful regional and global summaries of TB metrics

summarise_metric()

Summarise a TB Metric - A Quick Look Summary

summarise_tb_burden()

Summarise TB Burden - By Region, Globally and for Custom Groups

Map WHO Tuberculosis Data

Make maps of the WHO tuberculois data

map_tb_burden()

Map TB Burden

Plot WHO Tuberculosis Data

Generate exploratory plots of the WHO Tuberulosis data.

plot_tb_burden()

Plot TB Burden by Country

plot_tb_burden_overview()

Plot an overview of TB Burden for Multiple Countries

plot_tb_burden_summary()

Plot Summaries of TB Burden - By Region, Globally and for Custom Groups

Dashboards

Launch interactive dashboards showcasing package functionality. These dashboards require the shiny package.

run_tb_dashboard()

Run a TB Shiny Dashboard

Reports

Render parameterised reports showcasing package functionality. These reports require the rmarkdown package.

render_country_report()

Render a Country Level TB Report

Themes and Palettes

Customised `{ggplot2} themes and colour palettes.

theme_who()

World Health Organization-inspired ggplot2 theme

who_palettes()

World Health Organization-inspired palettes

scale_colour_who()

Adds World Health Organization-inspired colours to plots

scale_fill_who()

Adds World Health Organization-inspired colours as fills to plots

for_presentation()

Presentation style plots

Helpers

search_data_dict()

Search the WHO TB Data Dictionary by Variable Name.

prepare_df_plot()

Generic Function to Prepare TB Burden Data for Plotting

Package Data

Data supplied with the package.

available_datasets

Available Datasets

who_shapefile

WHO shapefile